Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015938506.1_cds_XP_016483340.1_74465
CDS Infomation

[gene=LOC107804042] [db_xref=GeneID:107804042] [protein=dnaJ protein ERDJ2A-like] [protein_id=XP_016483340.1] [location=join(9973..10158,10252..10347,10689..10809,10911..11017,11186..11403,11671..11848,11950..12069,12694..12780,13296..13406,14666..15493)] [gbkey=CDS]
Sequence

ATGGCGGCTTCTGAAGAGAACAGCACACTTTTCCCCATTTTTGTCTTGACTTTAATGGCT
CTGCCATTAGTTCCTTACACTATAGTCAATTTATTTGGTGCTTTCAAGAAGAAGGCTGCC
AAAATCAACTGCCAGTGTTCGGTATGCGTTCGCTCTGGGAAGTATCATAAATCCATATTC
AAGCGGATTTCAAACTTCTCTACGTACAGTAATCTGACCCTTGTACTGCTGTGGGTCGTC
ATGGCTGTTCTTGTTTATTACATCAAACATATCAGCACTGAGGTCCAAATATTCGAGCCA
TTCAGTATTCTTGGACTAGAACATGGAGCTTCAGACTCCGAAATAAAGAAGGCATATCGA
AGACTTTCCATTCAGTATCATCCTGATAAAAATCCAGATCCAGAGGCGCACTCATACTTT
GTTGAATACATCTCAAAGGCTTATCAGTCTCTGACAGATCCAATATCTCGGGAAAATTTT
GAAAAATATGGCCATCCAGATGGACGACAGGGGCTTCAAATGGGCATTGCCCTCCCACAG
TTCCTTTTAAACATTGATGGAGCATCCGAGGGAATATTGTTGCTTGGAATTGTTGGAGTC
TGTATAATTCTGCCCCTGACAATTTCTGTTATATACTTGTCTAGGTCGTCAAAGTATACT
GGGAATTATGTCATGCACTCGACATTAGCCGCATATTACCACTTAATGAAGCCTTCTTTA
GCTCCAAGCAAGATCATGGATGTTTTCATTAAGGCTTCTGAATTCATGGATATTCCTGTT
CGGCGGACTGATGAAGAACCTCTGCAGAGAATATTTGTCTTGGTTAGAAGTGAGCTAAAC
CTGGATCTTAAGAATATTCGGCAGGAACAGGCTAAGTTTTGGAAGCAGCATCCTGCATTA
GTAAAGACTGAACTGTTGCTTCAAGCCCAATTGACACGTGAGACTGCAGCTTTGTCTCCA
ACTTTACAGCGTGATTTCAGACGTGTGCTTGAACTCGCACCTCGACTTCTGGAAGAGTTG
ATGAAGATGGCTATTATTCCACGCCCTCCCGTGGGGCATGGATGGCTAAGACCTGCAATA
GGAGTGGTGGAACTGACTCAGAGTGTTGTTCAGGCGGTACCTCTCAGTGCAAGGAAAGCA
GCAGGTGGATCCAGTGAAGGGTATGCACCGTTCTTGCAGCTGCCACACTTTAGTGAGGCT
GTGGTAAAAAAGATTGCAAGAAAGAAAGTCCGTACATTTCAAGACTTCCGTGATATGACA
CCAGATGAACGCGAAGATCTGCTGACTCAAGTTGCTGGGTTCTCAAACTCTGAATCCCAC
GATGTGGAGATGGTTCTTAAAATGATGCCTTCAGTGACAATTGATATCACTTGTGAGACA
GAAGGCGAGGAGGGAATTCAAGAGGGTGACATCGTTACCATGCATGCTTGGGTCACTCTC
AACCGTGGTAATGGCTTGATCCGTGCCCTTCCACATTGTCCGTATTTTCCTTTTGACAAA
GAAGAGAATTTCTGGTTGCTGCTTGCGGACTCCTTTTCGAATGATGTCTGGCTCTCCCAG
AAGGTTAGCTTCATGGATGAAGCTACAGCGATCATTGCTGTATCAAAAACGATTCAGGAG
TCAAAGGAAGGGTCTGGTGCAAGTGCAAGGGAAATAAATGTTGCCGTTAAAGAAGCAATT
GAGAAAGTGAAAAATGGTTCGAGGCTGGTAATGGGGAAGTTCCAAGCTCCAGCTGAGGGA
AACTACAACTTGAGCTCTTTCTGCTTATGTGACTCCTGGATTGGTTGTGATGCAAAGTCA
AATATAAAGTTAAAGGTAATGAAACGCAGCAGAGCTGGAACCAGAAGCGGTCTCACGGCA
GATGAGACTCCTGCCATGGAGGATGGAATTGAGGAGGACGAGGAAGAAGAAGAAGATGAT
TATGAAAGTGAATACAGCGAAGATGAAGAAGATACAAAGGAAACAAAGAGTAAAGGAGCG
GTGGCCAATGGCTCGGCCCACAATAAGGGCAGTGGTTCAACCTCTGATGAGTCTGGTTCA
GAGGCCGATTAA

Peptide Sequence

PEP ID

XP_016483340.1
PEP Infomation

PREDICTED: dnaJ protein ERDJ2A-like [Nicotiana tabacum]
Sequence

MAASEENSTLFPIFVLTLMALPLVPYTIVNLFGAFKKKAAKINCQCSVCVRSGKYHKSIF
KRISNFSTYSNLTLVLLWVVMAVLVYYIKHISTEVQIFEPFSILGLEHGASDSEIKKAYR
RLSIQYHPDKNPDPEAHSYFVEYISKAYQSLTDPISRENFEKYGHPDGRQGLQMGIALPQ
FLLNIDGASEGILLLGIVGVCIILPLTISVIYLSRSSKYTGNYVMHSTLAAYYHLMKPSL
APSKIMDVFIKASEFMDIPVRRTDEEPLQRIFVLVRSELNLDLKNIRQEQAKFWKQHPAL
VKTELLLQAQLTRETAALSPTLQRDFRRVLELAPRLLEELMKMAIIPRPPVGHGWLRPAI
GVVELTQSVVQAVPLSARKAAGGSSEGYAPFLQLPHFSEAVVKKIARKKVRTFQDFRDMT
PDEREDLLTQVAGFSNSESHDVEMVLKMMPSVTIDITCETEGEEGIQEGDIVTMHAWVTL
NRGNGLIRALPHCPYFPFDKEENFWLLLADSFSNDVWLSQKVSFMDEATAIIAVSKTIQE
SKEGSGASAREINVAVKEAIEKVKNGSRLVMGKFQAPAEGNYNLSSFCLCDSWIGCDAKS
NIKLKVMKRSRAGTRSGLTADETPAMEDGIEEDEEEEEDDYESEYSEDEEDTKETKSKGA
VANGSAHNKGSGSTSDESGSEAD

Transcript Sequence

Gene sequence data has not been registered.